DNA Sequence Assembler-USER MANUAL|DNA sequence assembly and DNA sequence analysis


	DNA Sequence Assembler v4 Online manual
	Installing DNA Sequence Assembler Index How to install DNA Baser for the first time How to upgrade DNA Baser How to un install DNA Baser Running multiple versions of DNA Baser simultaneously How to create a desktop shortcut to DNA BASER How to use it (basics) Main windows in DNA Baser Projects Project Manager window Log window Assembly window Settings window Vector cleaning window Automatic Updates window HOW TO ASSEMBLE SEQUENCES Single contig assembly Assemble to reference Batch contig assembly based on name pattern based on folders Automatic functions performed during sequence assembly Recall undetermined (N) bases with the embedded base caller Base quality assessment Trimming the untrusted regions of chromatograms Vector cleaning Post assembly Contig editing Correct ambiguities in the assembled contig DETECT MUTATIONS SNP mutation detection SEQUENCE PROCESSING AND CONVERSION Batch sequence processing Converting FASTA to multiFASTA Converting multiFASTA to FASTA GenBank 2 FASTA converter Dereplicate a clone library ADDITIONAL TOOLS Reverse complement (RC) tool Clone library dereplicator Ambiguity code table About file formats Index What is a chromatogram? What is a good chromatogram? Untrusted regions FAQ about confidence scores (confidence score) Automatic low quality ends trimming File formats supported by DNA Baser Tutorials Open/view a sequence Assemble sequences Assemble using a reference sequence Assemble using batch mode Edit one or more sequences. Edit the contig. Edit the contig (tutorial) How to use the search function Report a problem Tutorials - How to use DNA Sequence Assembler How to use it (basics) Adding files to Job List Sample viewer mode (Open single file) DNA sequence assembly and contig editing Assembling two chromatogram files Editing and saving the contig FAQ Sequence assembly FAQ Why DNA Baser cannot assemble (some of) my files? Do I have to save the contig every time I assemble some samples? Can I assemble multiFASTA files? Why DNA Baser does not automatically trim the low quality regions in my chromatograms? I have an error saying: Cannot open file. DNA Baser does not cut the recognition sequence (vector) correctly DNA Baser saves only a small part of the contig to disk DNA Baser does not create the contig with the right orientation General/Technical FAQ I need a small feature. Can you implement it? My 'Show Desktop' icon () is not working after installing DNA Baser DNA Sequence Assembler doesn't show any files in Project Manager How to run DNA Baser with elevated rights? How much RAM does DNA Sequence Assembler need? How to copy/print chromatograms from DNA Baser? About file formats FAQ Why I should NOT prefer Fasta files over SCF/ABI? What sample formats does DNA Baser recognize? Why SCF format is better than ABI format? How can I change the file extension of a file (sample)? Purchase FAQ/Unlock keys Details about the trial period What is the Unlock Key? Unlocking the program How to enter your key into the program? Troubleshooting key-related problems Purchase/Order details FAQ Can you send me a quote (proforma invoice)? I am not a customer. Can I get support? Who is "BlueSnap"? I need your bank details in order to send the payment Do I need to contact you before purchasing? I am from Asia. How can I order? Do you accept other currencies beside US dollars? Can I receive a CD? How long do I have to wait for my CD to arrive? How long do I have to wait for my key to arrive? Can I test the program before purchase? Is it safe to purchase online?		Links Email support Note: Items marked with contains video tutorials. More items will be added soon. Search our web site with

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