scf trace assembly
Welcome to DNA BASER’s official web siteFeatures and performancesScreen shots-DNA Baser Sequence AssemblerOrder your copy nowDNA sequencing info and newsDownload a full working version right nowContact us if you need more information
sequence assembly software
abi trace assembly

MultiFASTA Builder

Converts any file to multiFASTA file in seconds!
FASTA to multi-FASTA converter. Contig assembly software

 



 

MultiFasta Builder is a one-click file converter the merges the specified sample files (ABI, SCF, FASTA, multiFASTA, GBK, multiGBK, SEQ, TXT) in a single multiFasta file.

It can generate a standard multiFasta or custom multiFASTA file. Starting with version 3.0 protein FASTA files are also supported.

 

 

FASTA to multiFASTA converter

 

 

Installation

 

Starting with 2011, Fasta to multi-Fasta converter has been renamed to MultiFasta Builder and integrated in DNA Baser (together with other free molecular biology tools) and it can be accessed from the Tasks panel:

 

FASTA to multi-FASTA converter

 

 

To get this convertor, just download the DNA Baser package. The download time should be below 10 seconds.

 

download FASTA to multi-FASTA converter

 

 

How to use the MultiFasta Builder converter

  • In DNA Baser, start the MultiFasta Builder tool: open the 'Tasks' panel and click on 'Batch conversion'.
  • Locate the folder that contains your FASTA files.
  • Choose a name for the output file (the default name is "Result 1")
  • Press the 'Start' button.

 

 

The resulted multiFASTA file will be automatically saved in the same folder.

 

 

Output format

 

The program can generate three different types of multi-Fasta files:


I. Keep original comments (standard multi-Fasta)
     In this mode, the program will create standard multi-FASTA files where the original comment of each FASTA file will be kept. Recommended for most users.

 

II. File name as comment
     In this mode, the original comment of each FASTA file will be replaced with file's name.

 

III. No comments (compact multi-Fasta)
     In this mode, the comments will be completely removed from the resulted multi-Fasta file. However the contents will be saved in a file, separated by a semicolon.

     A second output file will contain the names of all input FASTA files.

 

 

 

Portability


This program is very small so you can easily copy it on a USB flash stick and take it with you or send it to your colleagues via email.

 

 


 

 

Similar programs

 

Name   Description
Batch sequence processing
Handy tool that automates the sequence processing job. It can apply the following operations to the specified samples: trim untrusted ends, remove vectors, integrate metadata, convert chromatograms (SCF/ABI) to FASTA.
GBK to FASTA converter
GBK to FASTA converter freeware
GenBank to FASTA is a freeware program will convert GenBank (gbk) file format to FASTA format.
ABI to FASTA converter
ABI to FASTA Converter
ABI to FASTA Converter is a free tool will convert all (selected) ABI files to FASTA files. All you need to do is to locate your ABI chromatogram files and press the CONVERT button.
multi-FASTA to FASTA converter
multi-FASTA to FASTA

multi-FASTA to FASTA is a freeware converter program that splits a multi-FASTA file in multiple standard FASTA files.

 

 

More free molecular biology programs

 

Name   Description
DNA Baser Sequence Assembler
DNA Baser Sequence Assembler
DNA Baser is a tool for DNA sequence assembly, DNA sequence analysis, contig editing, and mutation detection. It also offers a powerful chromatogram viewer/editor.
Chromatogram Explorer
Chromatogram Explorer
Chromatogram Explorer is a tool will display the content of all chromatogram files (SCF, ABI, AB1, AB) in the current folder. Working with chromatogram files will be a pleasure form now on!
Grid cell counter
Grid cell counter
Gird cell counter will help you to count faster the cells shown on computer's screen by displaying a grid over your image. Freeware.
DNA Counter
DNA Counter
DNA Counter will show the proportions between nucleotides in a DNA sequence (GC to AT ratio).

 

 

molecular biology software
DNA chromatogram assembly