contig assembly softwareDNA assembly software. DNA contig assembly.
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chromatogram assembly
abi trace assembly

The BEST priced sequence assembler on the market

Box-DNA sequence assembly software

What is DNA Baser Assembler?

DNA Baser Assembler is an easy to use software providing DNA sequence assembly functions (simple and batch), contig editing functions and chromatogram viewer/editor. We have created a fast assembly engine and a range of features that greatly speed up the process of sequence assembly and mutation analysis.

It provides automated sequence end trimming (clipping), so there is no need to trim manually the low quality bases from the ends of the trace files before contig assembly. This saves considerable time, especially when assembling many DNA sequences.

DNA BASER Assembler offers a smart navigation system that takes you to the location of each sequence ambiguity / mutation with only a single click. Our proprietary sequencing error correction algorithm provides further timesaving.

The truly user-friendly interface makes DNA Baser Assembler the best choice for DNA contig assembly. For more details, see the DNA BASER Assembler Features page.

This sequencer is ideal for assembly of all sequence types, including the SSU rRNA genes (16S and 18S rRNA), LSU rRNA genes (23S and 28S rRNA), protein genes, and/or genomic fragments.

DNA BASER Assembler is a valuable tool for studies of biodiversity, molecular ecology, sequencing of various functional and structural genes, or any application that is involved in the cloning and sequencing of DNA fragments. It can read sequences and chromatograms in either TXT, FASTA, SEQ, ABI, or SCF file format.

The DNA BASER Assembler package is offered at a very affordable price ($299 for Student license/ $599 for Academic/ $699 for Business), making it an ideal for universities, research institutions, laboratories or private companies performing DNA sequencing. Discounts apply if you purchase more than one license.

Starting with version 2.7, DNA Baser Assembler can assemble DNA contigs in batch mode. Now you can assemble all your sequences at once. Just define a pattern, press the start button and all contigs will be automatically created.

DNA contig assembly software


Did you know?

 

Did you know that even if DNA Baser Assembler is extremely powerful, it has a very simple interface? For example to assemble several files into a contig, you need less than 5 seconds and only 3 clicks. Don't believe us? Download our trial or watch this 5 seconds video and see it by your self!

Did you know that primers are automatically removed from contig by DNA Baser Assembler? Just insert your favorite primers in 'Primers database' and start the sequence assembly process.

Did you know that DNA Baser Assembler is the only software on the market that offers you synchronized view between sequences, contig and chromatogram files?

Did you know that DNA Baser Assembler is the only software on the market that uses anti-aliasing technologies to display the chromatograms? This complex algorithm is generally used in 3D applications (especially in 3D games) to make the image smoother and clear.

Did you know that you can set our sequence assembler to automatically save the output files (the contig and the assembly log) to disk? This means that you have to push less buttons which greatly improves your speed.

Did you know that you can 'Assemble to reference sequence'?

Did you know that DNA Baser Assembler is the only software which offers you navigation between mismatches (see the image below).

Did you know that the size of DNA Baser Assembler package is only 2MB? This means that you can send it to your friends over email; you can easily create backups, or transport it on floppy disks. It also means that it does not install hundreds of garbage files in your computer.

Did you know that you can use DNA Baser Assembler even after the trial period has expired? The only limitation that will appear is that you cannot save the contig anymore. However you can still assemble sequences or user internal tools (like the 'Reverse complement' tool).

Did you know that DNA Baser's price is not secret? You don't have to speak with a DNA Baser representative it order to find out its price. Also you can create your own quote/PO in 60 seconds. Please check our public prices list.

Did you know that you can purchase DNA Baser in less than two minutes and in the next two minutes you will have the key that unlocks the program? You don't have to wait 1-2 months until your purchase order clears or until your dongle key arrives.

Did you know that updates are free?



DNA Baser - sequence assembly software


What you should not miss on our web site:

* Free bioinformatics and molecular biology tools
* Free bioinformatics and molecular biology articles and documentation
* Open discussions (bioinformatics, molecular biology, sequence assembly)



How to make a contig in 5 seconds

5 seconds demo-DNA Baser - sequence assembly software

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DNA chromatogram assembly
sequence assembly