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Editing bases in a sequence

Editing the contig
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These is no difference between editing a chromatogram or editing the contig.

Editing a base

The editing functions can be accessed in different ways:
  - from the Edit base button in the main menu (see Fig. 1)
  - from the Edit base button pop-up menu (see Fig. 2)
  - double click the base that you want to edit

 

Edit contig ambigous bases
Fig. 1 - The main menu
Fig. 2 - The pop-up menu (right click)

 

 

Note: IUPAC ambiguity code in contig is also supported.

Hint: To edit a single sequence, double click that sequence in Project Manager to load it. Multiple sequences can also be easily edited in the Assembly window.




EXAMPLE:
In the next screen shot, you will see how to edit a base (the one indicated by the arrow).


Step one:

Choose the base you want to edit:

DNA contig assembly


Step two:

Double click that base to enter in EDIT mode:

scf trace assembly


Step three:

Input the new base. In our case, we replaced 'A' with 'G'.

scf trace assembly

 

Step four: Save the changes.

Also "How to edit the contig" tutorial


 

 

 

Related topics:
 * Edit a base (replace a base with other base or a gap)
 * Insert one or more bases. Inserting a column.
 * Delete one or more bases


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