Batch Assembly Command Line Tool
This is a the command line version of DNA Baser Sequence Assembler. Now you can harness the power and accuracy of DNA Baser at a new level by building your own sequence assembly pipeline (DOS scripts).
You can specify the following parameters:
Example of script (create a BAT or CMD file and paste this code in it):
This simple script will call DNA Baser Console using 'c:\samples' as input folder. All SCF samples in that folder will be assembled. The DNA Baser Console exactly as DNA Baser Sequence Assembler: it will automatically import samples, automatically trim low quality ends, remove recognitions sequences, correct the ambiguities and save the log and the contig to disk (in the c:\samples\out' folder in this example). Details
The price is the same as the price of a standard DNA Baser license (Academic or Business). However, if you already purchased a DNA Baser license, you can get DNA Baser Console for only $99. Place your order NOW.
What's new in this version...
News: The speed and memory requirements have been dramatically improved
What's in the package/How to install it...
DNA Baser Console is delivered in a small package together with other free molecular biology tools. Download the package and double click it. The programs inside the package will be extracted to the destination folder (specified by you). Go to the destination folder and double click the program you want to use.
DNA Baser Console installs in any computer even if you don't have administrator rights. To uninstall DNA Baser Console, just delete it.
This software tool is really small so you can easily copy it on a floppy disk or USB flash stick and take it with you or send it to your colleagues via email.
This tool is . Please help us make it better. Let us know if you have any feature requests and we will try to integrate them.
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